I own a 1997 ls400. It was quiet when I bought it and about 6 months later I heard a valve noise that would be noticeable at start up and then go away when warmed up. After awhile it took longer to go away. Then it was consistent in varying degrees which *BLEEP*ed me off. I researched valve adjustment and realised it is all done with shims and such which I would guess is very time consuming especially if you have 32 valves to check......I then made another discovery from this forum I believe. It could be the EGR pipe which is on the back of the block. I got my stethoscope [heater hose] and while running listened and the sound and when in the back of the block I heard it loud and clear the valve noise. Got a mirror and realised it [egr tube ] was cracked. I am not up to such a task of replacing this anymore and my starter went out. While the starter was replaced I had him replace the egr tube and the problem was/is gone. It also cured a vacume leak a rather big one but I really didnt notice a rough running engine,,,,but when I got it back it was as smoooth as silk and quiet. I hear this is a common [egr pipe] problem especially on high milage cars with worn engine mounts. I had the mounts replaced too. It may not be your problem but I would suggest checking the egr pipe before you dig in any further. It is also a real pain in the @ss to replace all 4 bolts. The manual states to remove the tranny to replace this tube....it can be done in other ways, much cheaper,,you need an inovative mechanic.