Done. Left the driver side window not working. This is a good lesson - even though the body is the same between 97 and 99 - wiring harness was changed in 08/98 and the door innards are not 100% compatible. Overall this is reasonable job even for somebody who never done this before.
Once you get the inner pannel out - get the speaker out, disconnect all connectors, remove the clips attaching harness to the door, the only connector that is a pain is at the very "back" of the door - need to get you hand inside of the door, squezze on connector and pull it out. I disconnected the door stop, then the door from the hinges - not from the body as it seems to be more difficult, moved it a bit away from the car, carefully pulled the wiring harness out, and removed the door, attached new one and re-assembled.