Thank you all for the advice. The power cycle(Disconnect the battery for 10 min, then hold the TILT button for like ten Seconds) worked, and now I am happy to say that the hole in my roof is closed. I really appreciate all of the comments and posts. On a side note, I ended up partially removing my headliner to get to the moonroof motor for a manual close but could not find the access point. If anyone still has any ideas or if it is even possible to close a moonroof without power, please post.