I finally got this issue resolved over the weekend. Thanks to everyone for their input.
It turns out there were multiple things wrong with the installation that led to this issue. I had this installed at a place called Sounds Deluxe in Clarendon Hills, IL. I wasn’t planning to disclose the installer (or the butcher as I now like to refer to him), but after what I found (and what I paid), I felt I had no choice.
To answers a few questions posed earlier in this thread…
• I have a 2006 Lexus IS 250 with Navigation System / Parking Assist (Rear view Monitor) / Lexus Premium 13 speaker audio. Nothing has been modified on this vehicle, except the addition of this sub.
• I had a Memphis subwoofer amp (Memphis 500:1) installed, with a Memphis 12” dual voice coil sub. This is a mono amp, but requires both a right and left input signal.
So, what was wrong?
• The left input signal going to the Memphis amp was tied to the tweeter of the left rear door. Subwoofer amps have a very hard time amplifying frequencies in that range.
• The right input signal going to the Memphis amp was tied to the woofer of the right rear door. Slightly better than the first bullet, but still incorrect as the Lexus factory amp does not send the lowest frequency ranges to the woofer’s found in the doors, it reserves those frequencies for the down firing sub found in the trunk.
• The right input signal’s polarity was reversed. Yes, that’s right, reversed. Slowing turning the gain up on the amp actually REDUCED bass initially as it was cancelling out the factory sub.
• The remote lead to the sub was pinched into the fuse box by a fuse. I can’t remember exactly what it was connected to, but it doesn’t matter because it was incorrect.
The net affect of all of this is a very weak and unusable input signal to the Memphis amp which means the input gain and the bass enhancer (the bass enhancer can be thought of as kind of a volume control on the amp) had to be at MAX to get any bass at all. Enter the rumbling noise when the car was shut off… Any noise at all on the input end that falls in the 20-200Hz range is going to shake the earth since the amp is set to max output.
The fix:
Simple really. I took the car apart until I could get at the factory down firing sub in the trunk (you have to get at it from the back seat, but not really that hard). Now you know exactly which wires need to be tapped and can easily deduce the polarity since you can actually see the connections going to the speaker. The butcher spliced line after line trying to find the correct ones. Unfortunately, I found all of his damage, and some of the splice marks weren’t even taped! How could you ever figure out what the correct wires were from trial and error? There’s like 60 wires in each bundle! More than half probably aren’t even for the audio system. Madness.
The second part of the fix was to tap the remote lead into the correct line. I took CrunchySkippy’s advice and used a voltmeter to test each line leading to the factory amp until I found what I was looking for. Basically, it breaks down like this: There are four connectors going to the factor amp. The first has four wires, two are “always on” 12V signals and the other two are grounds. The second connector is for speakers. The third connector (which has much finer wires leading to it) is the one of interest. And the fourth is more speakers. So back to the third connector… This connector encompasses all the leads that tell the amp what to do. For example: turn on/off, volume up/down, equalizer adjust, etc. There are two orange leads that go to this connector that will work nicely for tapping in the remote lead.
After all these modifications were made, the gain on the amp is at about 5% and the bass enhancer is at 0. So the rumbling/popping is completely gone when the vehicle is shut off (or inaudible). The new remote lead tap probably helped too. And the amp sounds MUCH better as it doesn't have to struggle so hard to produce bass.
In hindsight, I never would have done this if I know it was going to turn into such a mess. The butcher assured me that he knew what he was doing, but I think it’s safe to say that wasn’t the case. It’s a bit nerve racking to have a $40,000 dollar car in pieces in your garage.
BTW, I was also able to obtain a schematic of most the wiring in this model IS if anyone is interested (got this just after I figured stuff out the hard way). I have it as a hard copy right now, but can scan it in if there is interest.
Again, thanks to everyone for their help.