Thanks for the thoughts and the ideas. I FIXED it !! I thought I would pass along the issues and solution. I did jump the car correctly and did the correct procedure to jump start it.
I was surprised to find that it wouldnt start as many would be with these fine cars. I actually called the west coast last night which is 3 hours behind us and ask the the service advisor a few questions. He mentioned the same possible solutions, anti theft was activated, the battery jump went bad and blew the computer etc.. He then mentioned all the fuse boxes, two are inside the cabin, two in engine compartment and one in the trunk drivers side under the tool kit.
I spent the better part of the day checking fuses and found that the fuses on the left side of the car in the cabin and the trunk were not getting power. I then deducted that the engine compartment had to have the answer. I had previously checked the fuses up top but after discussing it with the service advisor, he said to take the fuse box apart (one by the battery) and unscrew the larger fuses. He said that upon initial inspection, those may not look blown but in actuality may be. I was skeptical but hey, what did I have to lose right ? I tried the first two and it took about 20 or so min. Nothing. I tried the third and I swear it looked perfect but when I pulled it out you could see it up real close and it was popped. It was the 140amp fuse (light brown) and I got another fuse, and bam, everything came back 100 percent. That ONE fuse controlled the car from going out of park, the heat/air, lights, pwr seats, heated seats, key fob, taillights, windows, locks, instrument panel and several other items. I couldnt have been happier. I called the service advisor back to thank him for his time and he was appreciative.
I guess what I learned is this, NEVER jump your Lexus if you can avoid it and if it doesnt start, go directly to the fuse box located parallel to the battery and open it up and go straight for the big fuses. The answer is simple once I found it. It saved me several hundred dollars by doing it myself and it were to happen to anyone that read this whole nonsense, you should be able to fix your car in about 20 minutes tops !
I hope no one ever has this happen but please learn from my mistakes and hopefully you can get it fixed quick and cheaply by yourself !