Ahh, another honda owner who has seen the light! I was once like you grasshopper. I in fact still own my 99 prelude which is up for sale to continue work on my 99 GS300. As far as the swap goes. It really isn't that difficult from what I've heard. You just have to make sure that the donor Aristo is a VVTi model. This however will be a very expensive option. I know because I've researched and am still contemplated this myself. After gathering most of the info needed, I estimated that the swap would end up costing around $10k after it was all said and done. So I started looking into just adding a turbo to the 2JZ-GE as apposed to the 2JZ-GTTE VVTi. Spending the same money or less you could probably make more power and get more for your money as these engines are essintially the same. My peeps over at SELOC.net have more experience with turbo GSs than me but don't worry, these guys actually own daily driven turbo GSs (I've seen them) so I trust them. This is what one of the members GGPIS3 recommended I do: "i would do a valve body upgrade/tranny cooler to hold the excess power. go with a stage 2 turbo kit (intercooled). lower compression with a headgasket and run 10-14 psi. that should put you right in your power goals. you can piece a kit together if u know what u need or just buy a kit from a well known manufacturer (SRT, PFS, Turboeast, etc)" Expect around 7K-10K for the project.
Another member Veritek said: "I myself have done the NA-T, with a Turbonetics T-66, GTE block, ARP head studs, Greddy head gasket, Valve body and TC tranny upgrade, ApexI dual exhausts and will be switching to Greddy e-Manage, so I'll letcha know what I finally end up with after tuning. This is my second setup. My first was a Turbonetics T04E, and stock GE trim with map-ECU controller, and she put down 290whp with stock exhaust (and TTE quad exhaust mufflers). If you want the pimp factor, do the GTE swap. It's about the same to do the GTE swap and building the GE block with forged internals. I was thinking about doing the forged internals when my rings blew in my first set up, but then you have to worry about the machine shop's quality of work, etc, vs getting a known quantity with a Toyota supplied GTE block."
You should try and talk to these guys. They would be glad to help you out.